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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6834582_6847044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6834582 - 6847044

Intron Length:

12463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTATCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TACATTTCAATT

Flanking Amino Acid:

PSDFLKSHSYVPKGHVWLEG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

0.79

0.8

83.7

25.7

Major PPT

73.9

0.54

0.8

69.2

35.7

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

50.8

0.1

1.5

65.31

39.9

Associated Gene:

Gene:

IMMP1L

Ensembl Gene ID:

ENSAPLG00000004693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041904

6825444 - 6848499

23056

ENSAPLT00000004825

6825444 - 6852003

26560