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Intron Name: Anas_platyrhynchos_platyrhynchos_5_685328_686950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

685328 - 686950

Intron Length:

1623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTATGTAAA

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

GAGTATCTAATT

Flanking Amino Acid:

SLLDKGVIMNDYIDTELLLC

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.3

75.9

35.2

Major BPS

85.7

0.89

0.8

22.2

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

42.5

-0.8

2.5

49.6

40.4

Minor BPS

48.1

-0

1.8

63.64

40.6

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016689

657280 - 710419

53140

ENSAPLT00000038926

679736 - 710419

30684

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000020974

659967 - 710419

50453

ENSAPLT00000045999

659967 - 710419

50453