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Intron Name: Anas_platyrhynchos_platyrhynchos_5_687052_687941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

687052 - 687941

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTATATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TACTTCATAACA

Flanking Amino Acid:

KFFQDLKEETGIDLENIVYY

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

78.6

0.71

79.6

32.9

Major PPT

81.5

0.71

0.9

78.3

39.6

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

64.9

0.46

1.6

73.15

38.5

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016689

657280 - 710419

53140

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000037131

686930 - 733510

46581

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000045999

659967 - 710419

50453

ENSAPLT00000020974

659967 - 710419

50453

ENSAPLT00000038926

679736 - 710419

30684