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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6887008_6897901_F

Intron Information:

Intron Rank:

134963

Intron Class:

major

Intron Phase:

Intron Coordinates:

6887008 - 6897901

Intron Length:

10894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

ATTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTATCATATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

74.7

35.4

Major BPS

88.7

0.96

0.8

36.5

Major PPT

83.9

0.76

0.9

81.3

35.7

Minor 5ss

38.9

-1.2

2.8

55.7

41.6

Minor BPS

52.3

0.15

1.9

77.22

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027956

6886478 - 6898389

11912