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Intron Name: Anas_platyrhynchos_platyrhynchos_5_689861_690980_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

689861 - 690980

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATTGATT

5'SS Class:

weak_major

3'SS Sequence:

TTTGTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TAAATATTATTC

Flanking Amino Acid:

LEPPEDQENQKIGWRAEFLP

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.1

70.8

38.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

46.1

-0.4

3.1

66.1

39.4

Minor BPS

45.7

-0.3

1.8

54.18

37.3

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016689

657280 - 710419

53140

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000037131

686930 - 733510

46581

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000045999

659967 - 710419

50453

ENSAPLT00000020974

659967 - 710419

50453

ENSAPLT00000038926

679736 - 710419

30684