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Intron Name: Anas_platyrhynchos_platyrhynchos_5_691975_710155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

691975 - 710155

Intron Length:

18181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTGGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TTGTGTAAAACT

Flanking Amino Acid:

KRGKSCMNTKCLIIGGGPCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

81.9

0.72

0.9

81.1

30.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

46.7

-0.1

2.3

72.12

45.1

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032052

657280 - 710419

53140

ENSAPLT00000045999

659967 - 710419

50453

ENSAPLT00000020974

659967 - 710419

50453

ENSAPLT00000038926

679736 - 710419

30684

ENSAPLT00000016689

657280 - 710419

53140

ENSAPLT00000037244

659967 - 710419

50453

ENSAPLT00000037131

686930 - 733510

46581