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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7009388_7013244_F

Intron Information:

Intron Rank:

126270

Intron Class:

major

Intron Phase:

Intron Coordinates:

7009388 - 7013244

Intron Length:

3857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTGGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTTCTGGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

27.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

69.6

0.44

64.3

41.5

Minor 5ss

32.8

-2

39.5

45.9

Minor BPS

44.7

-0.4

2.4

64.58

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041104

7008062 - 7016106

8045

ENSAPLT00000035174

7009163 - 7016106

6944