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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7016122_7041162_F

Intron Information:

Intron Rank:

126269

Intron Class:

major

Intron Phase:

Intron Coordinates:

7016122 - 7041162

Intron Length:

25041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.8

0.69

0.9

73.8

39.9

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

64.2

0.52

1.7

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018019

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025388

7014243 - 7041768

27526