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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7069253_7075134_F

Intron Information:

Intron Rank:

145953

Intron Class:

major

Intron Phase:

Intron Coordinates:

7069253 - 7075134

Intron Length:

5882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAG

U12 Branch Point Sequence:

CTTTTTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

72.5

39.9

Major BPS

63.7

0.34

1.5

63.4

Major PPT

83.5

0.75

0.9

85.6

26.4

Minor 5ss

37.3

-1.4

47.6

47.9

Minor BPS

65.7

0.35

1.5

67.62

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028636

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042310

7067688 - 7076287

8600

ENSAPLT00000025280

7067688 - 7076538

8851