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Intron Name: Anas_platyrhynchos_platyrhynchos_5_710513_732185_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

710513 - 732185

Intron Length:

21673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTCCG

5'SS Class:

major

3'SS Sequence:

TTGTATTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTAACATAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.2

59.2

45.4

Major BPS

0.52

1.1

77.7

35.3

Major PPT

80.9

0.69

0.9

73.8

41.4

Minor 5ss

36.5

-1.5

2.9

43.7

43.2

Minor BPS

61.4

0.34

1.9

77.78

37.1

Associated Gene:

Gene:

MICAL2

Ensembl Gene ID:

ENSAPLG00000015960

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037131

686930 - 733510

46581