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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7132465_7172886_F

Intron Information:

Intron Rank:

123418

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7132465 - 7172886

Intron Length:

40422

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

TTG|GTTCCTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTTGTTTGCTTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

GTATCTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.7

0.13

1.3

63.7

42.9

Major BPS

78.2

0.7

79.9

32.6

Major PPT

43.3

-0.3

3.2

65.8

45.3

Minor 5ss

47.1

-0.3

2.8

41.3

Minor BPS

53.3

-0

1.7

58.96

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047990

7131472 - 7173058

41587