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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7168497_7175900_F

Intron Information:

Intron Rank:

134267

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7168497 - 7175900

Intron Length:

7404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCTGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

AAAACAAAAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.33

1.3

51.7

47.7

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

47.7

-0.2

2.9

65.1

46.1

Minor BPS

37.6

-0.9

43.95

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042620

7133117 - 7176140

43024