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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7310596_7311580_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7310596 - 7311580

Intron Length:
985

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAC|GTATGTATA

5'SS Class:
major

3'SS Sequence:
TCTGTCTGTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
GTATTCATAATG

Flanking Amino Acid:
ERQRRKLDSDGRTAKALKSL

Intron Amino Acid Position:
142

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.3
79.7
35.3

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
78.7
0.65
0.9
76.7
37.4

Minor 5ss
46.8
-0.3
2.5
58.7
39.4

Minor BPS
56.8
0.08
1.7
61.75
40.1

Associated Gene:

Gene:
ARL14EP

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7308223 - 7313482
5260

7300045 - 7313512
13468

7300246 - 7312087
11842