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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7312088_7313266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

7312088 - 7313266

Intron Length:

1179

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGCAC

5'SS Class:

major

3'SS Sequence:

ATGCTTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGATTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.4

37.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.4

0.55

0.9

66.6

Minor 5ss

-2.9

3.2

31.9

42.9

Minor BPS

55.5

0.03

1.4

54.64

41.7

Associated Gene:

Gene:

ARL14EP

Ensembl Gene ID:

ENSAPLG00000004333

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040565

7308223 - 7313482

5260

ENSAPLT00000040285

7300045 - 7313512

13468