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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7688038_7698424_R

Intron Information:

Intron Rank:

145650

Intron Class:

major

Intron Phase:

Intron Coordinates:

7688038 - 7698424

Intron Length:

10387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.4

0.73

0.8

74.8

38.8

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

0.67

1.5

84.29

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039824

7686751 - 7698660

11910