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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7797193_7838064_F

Intron Information:

Intron Rank:

140162

Intron Class:

major

Intron Phase:

Intron Coordinates:

7797193 - 7838064

Intron Length:

40872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TAAATTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

CCTCTCTAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

74.7

0.56

0.9

68.7

41.4

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

54.1

0.21

1.7

68.07

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036985

7796733 - 7858013

61281