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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7801156_7838064_F

Intron Information:

Intron Rank:

140165

Intron Class:

major

Intron Phase:

Intron Coordinates:

7801156 - 7838064

Intron Length:

36909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TAAATTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

CCTCTCTAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

74.7

0.56

0.9

68.7

41.4

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

54.1

0.21

1.7

68.07

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041042

7796733 - 7858013

61281