Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_7879441_7887256_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7879441 - 7887256

Intron Length:

7816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCTCA

5'SS Class:

weak_major

3'SS Sequence:

AAATGTATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ACCTTTTCAAAT

Flanking Amino Acid:

RTQQLASIVAGAFPASALYA

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.2

59.7

42.1

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

67.5

0.4

1.1

58.9

45.2

Minor 5ss

48.6

-0.1

2.8

66.1

44.9

Minor BPS

49.3

0.03

1.6

62.87

41.7

Associated Gene:

Gene:

METTL15

Ensembl Gene ID:

ENSAPLG00000004128

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039882

7878995 - 7970791

91797

ENSAPLT00000004234

7878995 - 7970791

91797