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Intron Name: Anas_platyrhynchos_platyrhynchos_5_796029_797299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

796029 - 797299

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

CTTTTTTCAACA

Flanking Amino Acid:

CASGLVCQSHSHSTTSVCEL

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

79.3

34.3

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

0.77

0.8

81.1

29.5

Minor 5ss

36.2

-1.6

3.4

51.2

45.7

Minor BPS

65.9

0.49

1.5

74.67

37.4

Associated Gene:

Gene:

DKK3

Ensembl Gene ID:

ENSAPLG00000015829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041179

770608 - 797656

27049

ENSAPLT00000016513

770608 - 798012

27405