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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7973984_7975037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7973984 - 7975037

Intron Length:

1054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTACCTTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATGC

Flanking Amino Acid:

VVVQGLTLHQPKSAEEILQM

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

100

1.24

0.5

100

Major PPT

71.1

0.47

70.6

33.8

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

55.8

0.16

2.1

75.51

40.9

Associated Gene:

Gene:

KIF18A

Ensembl Gene ID:

ENSAPLG00000003823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003917

7971510 - 8004629

33120

ENSAPLT00000024841

7971510 - 8007876

36367

ENSAPLT00000023574

7971447 - 8007876

36430