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Intron Name: Anas_platyrhynchos_platyrhynchos_5_797538_798003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

797538 - 798003

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATAAAGT

5'SS Class:

major

3'SS Sequence:

GTTTTTCCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTTCCTATAG

Flanking Amino Acid:

SAHDPFLGDEEM*

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

70.5

39.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

82.6

0.73

0.7

77.5

31.4

Minor 5ss

40.6

-1

58.1

46.1

Minor BPS

49.1

-0.2

2.1

65.07

42.5

Associated Gene:

Gene:

DKK3

Ensembl Gene ID:

ENSAPLG00000015829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016513

770608 - 798012

27405