Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_7982595_7983488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7982595 - 7983488

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

CTTTCTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTTCTTTAACA

Flanking Amino Acid:

ANRAKDIKSSLKSNVVSFDS

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.8

0.76

0.8

80.6

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

85.1

1.1

86.93

31.8

Associated Gene:

Gene:

KIF18A

Ensembl Gene ID:

ENSAPLG00000003823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024841

7971510 - 8007876

36367

ENSAPLT00000023574

7971447 - 8007876

36430

ENSAPLT00000003917

7971510 - 8004629

33120