Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_7983564_7983826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7983564 - 7983826

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AAAATTCTAACT

Flanking Amino Acid:

VKICNEQKKEIIMLKEKLRA

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

77.9

0.63

82.6

32.8

Minor 5ss

43.9

-0.7

2.8

58.4

46.1

Minor BPS

49.6

0.05

1.6

65.84

38.2

Associated Gene:

Gene:

KIF18A

Ensembl Gene ID:

ENSAPLG00000003823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003917

7971510 - 8004629

33120

ENSAPLT00000024841

7971510 - 8007876

36367

ENSAPLT00000023574

7971447 - 8007876

36430