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Intron Name: Anas_platyrhynchos_platyrhynchos_5_7993709_8003097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7993709 - 8003097

Intron Length:

9389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

GACTGTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

ATGTAAGTAAAT

Flanking Amino Acid:

QLVNKPNTPCCTTSGTPSQE

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

0.29

1.1

56.3

43.2

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

43.5

-0.4

2.4

66.1

43.8

Associated Gene:

Gene:

KIF18A

Ensembl Gene ID:

ENSAPLG00000003823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024841

7971510 - 8007876

36367

ENSAPLT00000023574

7971447 - 8007876

36430

ENSAPLT00000003917

7971510 - 8004629

33120