Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_8006099_8007519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8006099 - 8007519

Intron Length:

1421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ACTTTCTTCACT

Flanking Amino Acid:

NRVLRVPKIAGIGRRSWKEE

Intron Amino Acid Position:

884

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.59

0.8

70.9

34.6

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

67.3

0.63

1.7

81.49

40.5

Associated Gene:

Gene:

KIF18A

Ensembl Gene ID:

ENSAPLG00000003823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024841

7971510 - 8007876

36367

ENSAPLT00000023574

7971447 - 8007876

36430