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Intron Name: Anas_platyrhynchos_platyrhynchos_5_803096_804883_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

803096 - 804883

Intron Length:

1788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCACTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTTTTTTCCACT

Flanking Amino Acid:

SSSVEELKEKLSEVSGIPLE

Intron Amino Acid Position:

1259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

77.8

0.63

0.8

71.8

32.4

Minor 5ss

35.9

-1.6

3.3

50.8

45.8

Minor BPS

58.1

0.34

83.3

38.2

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863

ENSAPLT00000026421

801673 - 851535

49863