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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8059040_8060353_F

Intron Information:

Intron Rank:

140368

Intron Class:

major

Intron Phase:

Intron Coordinates:

8059040 - 8060353

Intron Length:

1314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

ATCACCTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

88.6

0.87

0.6

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

61.2

0.34

1.8

70.43

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047752

8058846 - 8062993

4148