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Intron Name: Anas_platyrhynchos_platyrhynchos_5_806429_807752_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

806429 - 807752

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTCTCCCTCATT

Flanking Amino Acid:

EQCGLDLTTDRFRLRKKTWK

Intron Amino Acid Position:

1175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

76.3

0.65

67.3

39.3

Major PPT

83.3

0.75

0.8

77.4

35.5

Minor 5ss

-2.2

3.2

45.7

Minor BPS

57.1

0.3

2.1

80.27

42.1

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863

ENSAPLT00000026421

801673 - 851535

49863