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Intron Name: Anas_platyrhynchos_platyrhynchos_5_809009_809184_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

809009 - 809184

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTATTCAG

5'SS Class:

major

3'SS Sequence:

TTCCTCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TAGTTACTAACA

Flanking Amino Acid:

TLSSFSDDNKITIRLGRALK

Intron Amino Acid Position:

1110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.2

62.8

43.1

Major BPS

76.8

0.67

0.9

75.9

Major PPT

84.3

0.77

0.7

79.9

25.7

Minor 5ss

-2.3

2.6

33.2

41.7

Minor BPS

50.8

0.02

1.9

66.34

39.6

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863

ENSAPLT00000026421

801673 - 851535

49863