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Intron Name: Anas_platyrhynchos_platyrhynchos_5_813283_814288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

813283 - 814288

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATTACTTTACGC

Flanking Amino Acid:

VSEFKQLISKATHLPAETMR

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

80.3

28.1

Major BPS

0.75

78.6

Major PPT

0.67

0.8

78.3

34.8

Minor 5ss

40.6

-1.1

2.8

52.6

44.6

Minor BPS

50.3

-0

1.9

64.99

40.9

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863