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Intron Name: Anas_platyrhynchos_platyrhynchos_5_814405_814817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

814405 - 814817

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCCCTACAG

Flanking Amino Acid:

DQIFQCYKPGEVMVKVHVVD

Intron Amino Acid Position:

713

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

79.7

35.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.6

0.73

0.7

76.4

25.9

Minor 5ss

-1.6

47.1

42.6

Minor BPS

48.7

-0.2

2.1

61.25

46.2

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863