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Intron Name: Anas_platyrhynchos_platyrhynchos_5_815026_816037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

815026 - 816037

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCATA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

AAGCCATTATTT

Flanking Amino Acid:

LKEAVEIAYKLMDLEEAVPL

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

79.7

35.3

Major BPS

68.5

0.46

75.3

29.8

Major PPT

78.3

0.64

0.9

77.7

36.7

Minor 5ss

-0.1

2.5

65.8

45.4

Minor BPS

47.7

-0.1

1.8

62.54

41.3

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863