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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8165544_8168308_F

Intron Information:

Intron Rank:

133156

Intron Class:

major

Intron Phase:

Intron Coordinates:

8165544 - 8168308

Intron Length:

2765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

GTCGCTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GGAACATAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

82.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.1

0.52

0.9

65.8

Minor 5ss

36.7

-1.5

3.5

55.8

48.4

Minor BPS

46.6

-0.2

1.9

55.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017991

8159853 - 8169469

9617