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Intron Name: Anas_platyrhynchos_platyrhynchos_5_817152_819577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

817152 - 819577

Intron Length:

2426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTATTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTTTATTC

Flanking Amino Acid:

YRLKDPARNAKFLEAHEYPD

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

80.7

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

73.2

37.1

Minor 5ss

35.6

-1.6

2.8

42.7

38.3

Minor BPS

60.4

0.31

1.6

68.82

37.9

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863

ENSAPLT00000026421

801673 - 851535

49863