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Intron Name: Anas_platyrhynchos_platyrhynchos_5_821263_823475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

821263 - 823475

Intron Length:

2213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTATCATAACT

Flanking Amino Acid:

ERISKVGSEKNSLLYELFSV

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.81

0.6

84.8

22.9

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

70.7

0.73

1.6

89.65

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863