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Intron Name: Anas_platyrhynchos_platyrhynchos_5_823644_824343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

823644 - 824343

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGTTGTATAACA

Flanking Amino Acid:

MSIFIDVEDEKSPQTESCTD

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.9

0.63

82.5

32.9

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

55.6

0.17

72.93

38.9

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863