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Intron Name: Anas_platyrhynchos_platyrhynchos_5_824497_824591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

824497 - 824591

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTACTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTGTCTTTACTT

Flanking Amino Acid:

RCKKKCDARKGLRFLHFPYL

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

84.4

33.5

Major BPS

0.75

78.6

Major PPT

77.3

0.61

0.9

77.3

36.7

Minor 5ss

-0.9

2.9

58.6

45.7

Minor BPS

69.1

0.68

1.6

83.09

39.1

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863

ENSAPLT00000026421

801673 - 851535

49863