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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8261184_8261820_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8261184 - 8261820

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGTA

5'SS Class:

strong_major

3'SS Sequence:

TATTTGAGTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTATTTGAGT

Flanking Amino Acid:

DQGTLVDREKADADVLRNDE

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

73.1

38.2

Major BPS

100

1.24

0.5

100

Major PPT

72.3

0.5

1.1

65.9

Minor 5ss

32.4

-2

3.6

46.9

Minor BPS

0.46

1.8

83.83

37.3

Associated Gene:

Gene:

LGR4

Ensembl Gene ID:

ENSAPLG00000003183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003293

8223967 - 8266296

42330