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Intron Name: Anas_platyrhynchos_platyrhynchos_5_828807_829612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

828807 - 829612

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATTTGTTTAAAG

Flanking Amino Acid:

LEQKWKQTEQADLINQLYQG

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

83.4

28.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

83.1

0.74

0.9

77.9

35.1

Minor 5ss

36.3

-1.5

3.3

49.5

46.6

Minor BPS

58.1

0.12

1.9

66.8

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863