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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8290854_8291732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8290854 - 8291732

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTAATT

5'SS Class:

major

3'SS Sequence:

CTTGTACTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

EESEKKKREKEKEKEREAEL

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

79.1

34.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.3

0.68

0.9

73.1

36.4

Minor 5ss

45.6

-0.5

2.9

66.8

44.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

CCDC34

Ensembl Gene ID:

ENSAPLG00000003124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003166

8272873 - 8293716

20844