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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8291875_8293501_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8291875 - 8293501

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTATT

5'SS Class:

major

3'SS Sequence:

CTAAATGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTTTTTCTAAAT

Flanking Amino Acid:

GYGFPHRKSTGRPDGNSYPA

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.1

84.7

32.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

65.8

0.36

62.1

43.8

Minor 5ss

44.1

-0.6

2.5

60.5

43.9

Minor BPS

63.9

0.51

1.7

85.47

34.3

Associated Gene:

Gene:

CCDC34

Ensembl Gene ID:

ENSAPLG00000003124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003166

8272873 - 8293716

20844