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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8319940_8326067_F

Intron Information:

Intron Rank:

132379

Intron Class:

major

Intron Phase:

Intron Coordinates:

8319940 - 8326067

Intron Length:

6128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTCCTGCTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

74.1

0.54

0.9

69.2

35.7

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

46.8

-0.2

2.3

64.87

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045770

8319785 - 8337665

17881

ENSAPLT00000026255

8319785 - 8344172

24388