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Intron Name: Anas_platyrhynchos_platyrhynchos_5_833688_834869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

833688 - 834869

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTATGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTGTATTAAAT

Flanking Amino Acid:

KDGEQPHIRSEESGTTDDSM

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

74.5

37.6

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

76.8

0.6

0.9

74.3

40.5

Minor 5ss

34.1

-1.8

42.1

44.8

Minor BPS

0.42

1.8

82.05

39.1

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026421

801673 - 851535

49863

ENSAPLT00000015975

801673 - 851535

49863