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Intron Name: Anas_platyrhynchos_platyrhynchos_5_839149_851496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

839149 - 851496

Intron Length:

12348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTATATACTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATAT

Flanking Amino Acid:

SEENQLVPKEDMFWSCRQSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.52

0.9

67.1

38.7

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

58.4

0.34

1.7

76.23

40.9

Associated Gene:

Gene:

USP47

Ensembl Gene ID:

ENSAPLG00000015288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015975

801673 - 851535

49863