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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8507129_8509309_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8507129 - 8509309

Intron Length:

2181

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCCTGCATC

5'SS Class:

weak_major

3'SS Sequence:

TCGAACTTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAG

U12 Branch Point Sequence:

CTATGTCGAACT

Flanking Amino Acid:

TQTLCSLSPTSPEINKFVVW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.4

66.4

41.8

Major BPS

51.9

0.05

1.6

63.4

42.8

Major PPT

68.5

0.42

0.9

61.3

39.7

Minor 5ss

37.6

-1.4

56.6

41.2

Minor BPS

45.3

-0.2

2.1

66.18

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020117

8507044 - 8511332

4289