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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8516816_8517272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8516816 - 8517272

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ATTTACTTAACA

Flanking Amino Acid:

FVACAFSGTLSTVAASINAL

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

85.9

0.81

0.7

80.4

25.1

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

0.97

1.3

87.3

29.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003528

8515367 - 8519651

4285