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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8554602_8555323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8554602 - 8555323

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATGCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TAAATCATAATC

Flanking Amino Acid:

RFYDDTGNDPVLHLDNSLGP

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

74.5

0.61

79.6

29.1

Major PPT

77.3

0.61

69.4

41.1

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

52.6

0.06

1.6

62.13

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029686

8552417 - 8555484

3068