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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8616340_8728868_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8616340 - 8728868

Intron Length:

112529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

TACAGCTTCATT

Flanking Amino Acid:

QLHYSRSAPAGMNTSKSETV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.4

Major BPS

69.2

0.48

1.3

71.9

Major PPT

84.2

0.77

0.8

76.4

37.6

Minor 5ss

41.6

-0.9

3.1

53.5

44.6

Minor BPS

46.8

-0.1

2.2

65.34

45.5

Associated Gene:

Gene:

ANO3

Ensembl Gene ID:

ENSAPLG00000003833

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037470

8530762 - 8729022

198261

ENSAPLT00000027386

8530417 - 8729022

198606