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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8854733_8868524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8854733 - 8868524

Intron Length:

13792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTCTTTATTC

Flanking Amino Acid:

RYGKKDLIFKAQQLTDLEQK

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.3

0.73

0.8

31.7

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

66.8

0.51

1.5

73.5

38.4

Associated Gene:

Gene:

LUZP2

Ensembl Gene ID:

ENSAPLG00000004287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004400

8808937 - 8993181

184245

ENSAPLT00000004399

8808550 - 8997421

188872