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Intron Name: Anas_platyrhynchos_platyrhynchos_5_8870680_8899804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8870680 - 8899804

Intron Length:

29125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

GGTAATAAAACT

Flanking Amino Acid:

SKMIRDLQNENKSLKNKLLS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

70.8

0.52

70.6

31.6

Major PPT

87.1

0.83

0.6

85.7

21.4

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

42.6

-0.4

60.46

42.4

Associated Gene:

Gene:

LUZP2

Ensembl Gene ID:

ENSAPLG00000004287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004400

8808937 - 8993181

184245

ENSAPLT00000004399

8808550 - 8997421

188872